2008.bib

@COMMENT{{This file has been generated by bib2bib 1.80}}
@COMMENT{{Command line: bib2bib -ob 2008.bib -s author -c year=2008 publications.bib}}

@INPROCEEDINGS{Alex:2008:CCT,
  AUTHOR = {Alex, Beatrice},
  TITLE = {Comparing Corpus-based to Web-based Lookup Techniques for Automatic English Inclusion Detection},
  BOOKTITLE = {Proceedings of the 6th International Conference on Language Resources and Evaluation (LREC 2008)},
  YEAR = {2008},
  ADDRESS = {Marrakech, Morocco},
  URL = {./papers/Alex2008Comparing.pdf},
  KEYWORDS = {seer, }
}

@INPROCEEDINGS{Alex:2008:ACD,
  AUTHOR = {Alex, Beatrice and  Grover, Claire and Haddow, Barry and Kabadjov, Mijail and  Klein, Ewan and  Matthews, Michael and  Roebuck, Stuart and Tobin, Richard and Wang, Xinglong},
  EDITOR = {Altman, Russ B. and Dunker, A. Keith and Hunter, Lawrence and Murray, Tiffany and Klein, Teri E.},
  TITLE = {Assisted Curation: Does Text Mining Really Help},
  BOOKTITLE = {BIOCOMPUTING 2008. Proceedings of the Pacific Symposium on Biocomputing},
  YEAR = 2008,
  ADDRESS = {Kohala Coast, Hawaii, USA},
  URL = {http://psb.stanford.edu/psb-online/proceedings/psb08/alex.pdf},
  KEYWORDS = {txm, }
}

@INPROCEEDINGS{Alex:2008:,
  AUTHOR = {Alex, Beatrice and  Grover, Claire and Haddow, Barry and Kabadjov, Mijail and  Klein, Ewan and  Matthews, Michael and Tobin, Richard and Wang, Xinglong},
  TITLE = {The {ITI} {TXM} Corpora: Tissue Expressions and Protein-Protein Interactions},
  BOOKTITLE = {Proceedings of the Workshop on Building and Evaluating Resources for Biomedical Text Mining at the 6th International Conference on Language Resources and Evaluation (LREC 2008)},
  YEAR = 2008,
  ADDRESS = {Marrakech, Morocco},
  URL = {./papers/Alex2008Corpora.pdf},
  KEYWORDS = {txm, ttt2, }
}

@ARTICLE{Alex:2008:ACU,
  AUTHOR = {Alex, Beatrice and  Grover, Claire and Haddow, Barry and Kabadjov, Mijail and  Klein, Ewan and  Matthews, Michael and Tobin, Richard and Wang, Xinglong},
  TITLE = {Automating Curation Using a Natural Language Processing Pipeline},
  JOURNAL = {Genome Biology},
  YEAR = {2008},
  VOLUME = {9(Suppl 2)},
  PAGES = {S10},
  URL = {http://genomebiology.com/2008/9/S2/S10},
  KEYWORDS = {txm, ttt2, }
}

@INPROCEEDINGS{Grover:2008:NER,
  AUTHOR = {Grover, Claire and Givon, Sharon and Tobin, Richard and Ball, Julian},
  TITLE = {Named Entity Recognition for Digitised Historical Texts},
  BOOKTITLE = {Proceedings of the 6th International Conference on Language Resources and Evaluation (LREC 2008)},
  YEAR = {2008},
  ADDRESS = {Marrakech, Morocco},
  URL = {./papers/bopcris-lrec.pdf},
  KEYWORDS = {bopcris, ttt2, }
}

@INPROCEEDINGS{Haddow:2008:UAF,
  AUTHOR = {Haddow, Barry},
  TITLE = {Using Automated Feature Optimisation to Create an Adaptable Relation Extraction System},
  BOOKTITLE = {Proceedings of BioNLP 2008},
  YEAR = 2008,
  ADDRESS = {Columbus, Ohio},
  URL = {http://www.aclweb.org/anthology-new/W/W08/W08-0603.pdf},
  KEYWORDS = {txm, }
}

@INPROCEEDINGS{Haddow:2008:EMA,
  AUTHOR = {Haddow, Barry and Alex, Beatrice},
  TITLE = {Exploiting Multiply Annotated Corpora in Biomedical Information Extraction Tasks},
  BOOKTITLE = {Proceedings of the 6th International Conference on Language Resources and Evaluation (LREC 2008)},
  YEAR = {2008},
  ADDRESS = {Marrakech, Morocco},
  URL = {./papers/Haddow2008Exploiting.pdf},
  KEYWORDS = {txm, }
}

@ARTICLE{Leitner:2008:IMS,
  AUTHOR = {Leitner, Florian and Krallinger, Martin and Rodriguez-Penagos, Carlos and Hakenberg, J\"org and Plake, Conrad and Kuo, Cheng-Ju and Hsu, Chun-Nan and Tzong-Han Tsai, Richard and Hung, Hsi-Chuan and Lau, William W. and Johnson, Calvin A. and S\ae{}tre, Rune and Yoshida, Kazuhiro and Chen, Yan Hua and Kim, Sun and Shin, Soo-Yong and Zhang, Byoung-Tak and Baumgartner Jr., William A. and Hunter, Lawrence and Haddow, Barry and Matthews, Michael and Wang, Xinglong and Ruch, Patrick and Ehrler, Fr\'ed\'eric and \"Ozg\"ur, Arzucan and Erkan, G\"une\c{s} and Radev, Dragomir R. and Krauthammer, Michael and Luong, TahiBinh and Hoffmann, Robert and Sander, Chris and Valencia, Alfonso},
  TITLE = {Introducing Meta-Services for Biomedical Information Extraction},
  JOURNAL = {Genome Biology},
  YEAR = {2008},
  VOLUME = {9(Suppl 2)},
  PAGES = {S6},
  URL = {http://genomebiology.com/2008/9/S2/S6},
  KEYWORDS = {txm, }
}

@ARTICLE{Morgan:2008:OOB,
  AUTHOR = {Morgan, Alexander A. and Lu, Zhiyong and Wang, Xinglong and Cohen, Aaron M. and Fluck, Juliane and Ruch, Patrick and Divoli, Anna and Fundel, Katrin and Leaman, Robert and Hakenberg, J\"org and Sun, Chengjie and Liu, Heng-hui and Torres, Rafael and Krauthammer, Michael and Lau, William W. and Liu, Hongfang and Hsu, Chun-Nan and Schuemie, Martijn and Hirschman, Lynette},
  TITLE = {Overview of {BioCreative II} Gene Normalization},
  JOURNAL = {Genome Biology},
  YEAR = {2008},
  VOLUME = {9(Suppl 2)},
  PAGES = {S3},
  URL = {http://genomebiology.com/2008/9/S2/S3},
  KEYWORDS = {txm, }
}

@ARTICLE{Smith:2008:OOB,
  AUTHOR = {Smith, Larry and Tanabe, Lorraine K. and Johnson (nee Ando), Rie and Kuo, Cheng-Ju and Chung, I-Fang and Lin, Yu-Shi and Klinger, Roman and Friedrich, Christoph M. and Ganchev, Kuzman and Torii, Manabu and Liu, Hongfang and Haddow, Barry and Struble, Craig A. and Povinelli, Richard J. and Vlachos, Andreas and Baumgartner Jr., William A. and Hunter, Lawrence and Carpenter, Bob and Tzong-Han Tsai, Richard and Dai, Hong-Jie and Liu, Feng and Chen, Yifei and Sun, Chengjie and Katrenko, Sophia and Adriaans, Pieter and Blaschke, Christian and Torres, Rafael and Neves, Mariana and Nakov, Preslav and Divoli, Anna and Ma\~{n}a-L\'opez, Manuel and Mata-V\'azquez, Jacinto and Wilbur, W. John},
  TITLE = {Overview of {BioCreative II} Gene Mention Recognition},
  JOURNAL = {Genome Biology},
  YEAR = {2008},
  VOLUME = {9(Suppl 2)},
  PAGES = {S2},
  URL = {http://genomebiology.com/2008/9/S2/S2},
  KEYWORDS = {txm, }
}

@INPROCEEDINGS{Wang:2008:LTS,
  AUTHOR = {Wang, Xinglong and Grover, Claire},
  TITLE = {Learning the Species of Biomedical Named Entities from Annotated Corpora},
  BOOKTITLE = {Proceedings of the 6th International Conference on Language Resources and Evaluation (LREC 2008)},
  YEAR = {2008},
  ADDRESS = {Marrakech, Morocco},
  URL = {./papers/Wang2008Learning.pdf},
  KEYWORDS = {txm, ttt2, }
}

@INPROCEEDINGS{Wang:2008:SDB,
  AUTHOR = {Wang, Xinglong and Matthews, Michael},
  TITLE = {Species Disambiguation for Biomedical Term Identification},
  BOOKTITLE = {Proceedings of BioNLP 2008},
  YEAR = 2008,
  ADDRESS = {Columbus, Ohio},
  URL = {http://www.aclweb.org/anthology-new/W/W08/W08-0610.pdf},
  KEYWORDS = {txm, }
}

@INPROCEEDINGS{Wang:2008:CUM,
  AUTHOR = {Wang, Xinglong and Matthews, Michael},
  EDITOR = {Altman, Russ B. and Dunker, A. Keith and Hunter, Lawrence and Murray, Tiffany and Klein, Teri E.},
  TITLE = {Comparing Usability of Matching Techniques for Normalising Biomedical Named Entities},
  BOOKTITLE = {BIOCOMPUTING 2008. Proceedings of the Pacific Symposium on Biocomputing},
  YEAR = {2008},
  ADDRESS = {Kohala Coast, Hawaii, USA},
  URL = {http://psb.stanford.edu/psb-online/proceedings/psb08/wang.pdf},
  KEYWORDS = {txm, }
}


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